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Mixture Hidden Markov Models for Sequence Data: the seqHMM Package in R9 months ago
Introduction | Methods | Package features | Examples with life course data | Conclusion | Notations
The main algorithms used in the seqHMM package9 months ago
Introduction | Forward–Backward Algorithm | Viterbi Algorithm | Gradients
Visualization tools in the seqHMM package9 months ago
Introduction | Tools for visualizing multichannel sequence data | Tools for hidden Markov models | Helper tools
KFAS: Exponential Family State Space Models in R1 years ago
Introduction | Gaussian state space model | State space models for the exponential family | Residuals | Functionality of KFAS | Constructing common state space models with KFAS | Illustration | Other packages for non-Gaussian time series modelling | Discussion | Appendix: Filtering and smoothing recursions
Efficient Bayesian generalized linear models with time-varying coefficients2 years ago
Introduction | Illustration | Posterior predictive checks | Counterfactual predictions | Out-of-sample prediction | Extensions: Smoother effects and non-Gaussian models | Comparison with naive approach | Discussion | Acknowledgements | References
$\psi$-APF for non-linear Gaussian state space models3 years ago
Introduction | $\psi$-APF | $\psi$-APF for non-linear Gaussian models | Illustrations | Non-linear transition equation | Non-linear observation equation | Discussion | References
bssm: Bayesian Inference of Non-linear and Non-Gaussian State Space Models in R3 years ago
Introduction | State space models with linear-Gaussian dynamics | Non-linear models | Time-discretised diffusion models | Markov chain Monte Carlo | Package functionality | Model building functions | Filtering and smoothing | Acknowledgements | References
Diffusion models with bssm3 years ago
Introduction | Example | Appendix
Non-linear models with bssm3 years ago
Introduction | Model in bssm | Markov chain Monte Carlo | Appendix
diagis: Diagnostic plot and multivariate summary statistics of weighted samples from importance sampling5 years ago
Introduction | Illustrations | Weighted quantiles | References
Examples and tips for estimating Markovian models with seqHMM8 years ago
Model parameters | Tips for special cases | Restricted models | Tips for model estimation
ramcmc: Building blocks for Robust Adaptive Metropolis algorithm10 years ago
Introduction | RAM algorithm | Illustration | Linking to other R packages | References